Building on x86-bm-1.ocamllabs.io
(from ocaml/opam:debian-unstable)
WARNING: Error loading config file: .dockercfg: $HOME is not defined
Unable to find image 'ocaml/opam:debian-unstable' locally
debian-unstable: Pulling from ocaml/opam
Digest: sha256:a32e554d37007cabaf12da2261dad1c6890fb793357d4499f39865f3c85d81ab
Status: Downloaded newer image for ocaml/opam:debian-unstable
2021-09-03 15:20.17 ---> using "0acd5aeaa8f7bc314514d9795d14a7f12ec72a6a5b11c5904350189734c6859b" from cache
/: (user (uid 1000) (gid 1000))
/: (env OPAMPRECISETRACKING 1)
/: (env OPAMUTF8 never)
/: (env OPAMEXTERNALSOLVER builtin-0install)
/: (env OPAMCRITERIA +removed)
/: (run (shell "sudo ln -f /usr/bin/opam-2.1 /usr/bin/opam"))
2021-09-03 15:20.17 ---> using "4d29eb3e0b7cd69a97ed90837671d5ca38aa41e2fb94346298af500378eca6fa" from cache
/: (run (network host)
(shell "rm -rf ~/opam-repository && git clone -q 'git://github.com/ocaml/opam-repository.git' ~/opam-repository && git -C ~/opam-repository checkout -q 8fc7af65ccb8f3b3709bf02b749ac492e6700b59"))
2021-09-03 15:20.17 ---> using "eb095db6df41eeadc708604343f7b0ce0892db9136dac67a38046f57271c5802" from cache
/: (run (shell "rm -rf ~/.opam && opam init -ya --bare --config ~/.opamrc-sandbox ~/opam-repository"))
Configuring from /home/opam/.opamrc-sandbox, then /home/opam/.opamrc, and finally from built-in defaults.
Checking for available remotes: rsync and local, git.
- you won't be able to use mercurial repositories unless you install the hg command on your system.
- you won't be able to use darcs repositories unless you install the darcs command on your system.
<><> Fetching repository information ><><><><><><><><><><><><><><><><><><><><><>
[default] Initialised
User configuration:
~/.profile is already up-to-date.
[NOTE] Make sure that ~/.profile is well sourced in your ~/.bashrc.
2021-09-03 15:20.17 ---> using "d245c9af6f86b2b97434d338a3fbb8270425ab7dc6ad1b5451665adc9698eabf" from cache
/: (run (network host)
(shell "git clone -q 'git://github.com/ocaml/ocaml-beta-repository.git' ~/'beta' && git -C ~/'beta' checkout -q 79aeeadd813bdae424ab53f882f08bee0a4e0b89"))
2021-09-03 15:20.17 ---> using "20d9850dcecd0523d6eddecad814e9bbd93882334348605bfa6e15ffd8f5ced5" from cache
/: (run (shell "opam repository add --dont-select 'beta' ~/'beta'"))
[beta] Initialised
2021-09-03 15:20.17 ---> using "6f8879c5099d2146b69bdcec3874fd111cad6c5c42ac63d5f9aa72a228fd8ee8" from cache
/: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
(network host)
(shell "opam switch create --repositories=beta,default 4.08.1"))
<><> Installing new switch packages <><><><><><><><><><><><><><><><><><><><><><>
Switch invariant: ["ocaml-base-compiler" {= "4.08.1"} | "ocaml-system" {= "4.08.1"}]
<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
-> installed base-bigarray.base
-> installed base-threads.base
-> installed base-unix.base
-> retrieved ocaml-base-compiler.4.08.1 (cached)
-> installed ocaml-base-compiler.4.08.1
-> installed ocaml-config.1
-> installed ocaml.4.08.1
Done.
# Run eval $(opam env --switch=4.08.1) to update the current shell environment
2021-09-03 15:20.17 ---> using "3b2d7887954bce1c4fe8757a8a21d87040e70622692502bb8636040e7549e639" from cache
/: (run (network host)
(shell "opam update --depexts"))
+ /usr/bin/sudo "apt-get" "update"
- Get:1 http://deb.debian.org/debian unstable InRelease [165 kB]
- Get:2 http://deb.debian.org/debian unstable/main amd64 Packages.diff/Index [63.6 kB]
- Ign:2 http://deb.debian.org/debian unstable/main amd64 Packages.diff/Index
- Get:3 http://deb.debian.org/debian unstable/main amd64 Packages [8766 kB]
- Fetched 8994 kB in 3s (3165 kB/s)
- Reading package lists...
-
2021-09-03 15:20.17 ---> using "a1a34dd6254b0880f63d8cba275a31f058b4f59b63e4d68899d68af1ddf46b6c" from cache
/: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
(network host)
(shell "\
\nopam remove -y \"conf-sundials.1\"\
\nopam install -vy \"conf-sundials.1\"\
\nres=$?\
\nif [ $res = 31 ]; then\
\n if opam show -f x-ci-accept-failures: \"conf-sundials.1\" | grep -q '\"debian-unstable\"'; then\
\n echo \"This package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\"\
\n exit 69\
\n fi\
\nfi\
\n\
\n\
\nexit $res\
\n"))
[NOTE] conf-sundials.1 is not installed.
Nothing to do.
The following actions will be performed:
- install conf-sundials 1
The following system packages will first need to be installed:
libsundials-dev
<><> Handling external dependencies <><><><><><><><><><><><><><><><><><><><><><>
Let opam run your package manager to install the required system packages?
(answer 'n' for other options) [Y/n] y
+ /usr/bin/sudo "apt-get" "install" "-qq" "-yy" "libsundials-dev"
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- Setting up libpsm-infinipath1 (3.3+20.604758e7-6.1) ...
- update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode
- Setting up libsundials-cvodes4:amd64 (5.7.0+dfsg-1) ...
- Setting up libopengl-dev:amd64 (1.3.4-1) ...
- Setting up libjs-jquery (3.5.1+dfsg+~3.5.5-7) ...
- Setting up libsundials-kinsol4:amd64 (5.7.0+dfsg-1) ...
- Setting up libscotch-6.1:amd64 (6.1.0-2) ...
- Setting up libbinutils:amd64 (2.37-5) ...
- Setting up libdrm-common (2.4.107-2) ...
- Setting up libelf1:amd64 (0.185-2) ...
- Setting up libxml2:amd64 (2.9.12+dfsg-3) ...
- Setting up libsuitesparseconfig5:amd64 (1:5.8.1+dfsg-2) ...
- Setting up libcc1-0:amd64 (11.2.0-3) ...
- Setting up liblsan0:amd64 (11.2.0-3) ...
- Setting up libprocps8:amd64 (2:3.3.17-5) ...
- Setting up cpp-10 (10.3.0-9) ...
- Setting up libsz2:amd64 (1.0.5-2) ...
- Setting up libitm1:amd64 (11.2.0-3) ...
- Setting up libsundials-sunmatrix2:amd64 (5.7.0+dfsg-1) ...
- Setting up librbio2:amd64 (1:5.8.1+dfsg-2) ...
- Setting up libpython3.9-stdlib:amd64 (3.9.7-1) ...
- Setting up libpython3-stdlib:amd64 (3.9.2-3) ...
- Setting up libevent-pthreads-2.1-7:amd64 (2.1.12-stable-1) ...
- Setting up libtsan0:amd64 (11.2.0-3) ...
- Setting up libwayland-client0:amd64 (1.19.0-2) ...
- Setting up libctf0:amd64 (2.37-5) ...
- Setting up libamd2:amd64 (1:5.8.1+dfsg-2) ...
- Setting up libx11-xcb1:amd64 (2:1.7.2-1) ...
- Setting up libgraphblas3:amd64 (1:5.8.1+dfsg-2) ...
- Setting up libevent-extra-2.1-7:amd64 (2.1.12-stable-1) ...
- Setting up liblapack3:amd64 (3.10.0-1) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode
- Setting up libfftw3-single3:amd64 (3.3.8-2) ...
- Setting up libopenblas0-pthread:amd64 (0.3.17+ds-2) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode
- update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode
- update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblas.so.0 to provide /usr/lib/x86_64-linux-gnu/libopenblas.so.0 (libopenblas.so.0-x86_64-linux-gnu) in auto mode
- Setting up libcolamd2:amd64 (1:5.8.1+dfsg-2) ...
- Setting up libtool (2.4.6-15) ...
- Setting up libarchive13:amd64 (3.4.3-2+b1) ...
- Setting up libgcc-10-dev:amd64 (10.3.0-9) ...
- Setting up libaec-dev:amd64 (1.0.5-2) ...
- Setting up libjpeg-dev:amd64 (1:2.0.6-4) ...
- Setting up libx11-dev:amd64 (2:1.7.2-1) ...
- Setting up libsuperlu5:amd64 (5.2.2+dfsg1-2) ...
- Setting up libevent-openssl-2.1-7:amd64 (2.1.12-stable-1) ...
- Setting up libfftw3-long3:amd64 (3.3.8-2) ...
- Setting up m4 (1.4.18-5) ...
- Setting up libxxf86vm1:amd64 (1:1.1.4-1+b2) ...
- Setting up libnuma-dev:amd64 (2.0.12-1+b1) ...
- Setting up libnl-route-3-200:amd64 (3.4.0-1+b1) ...
- Setting up libsliplu1:amd64 (1:5.8.1+dfsg-2) ...
- Setting up libxnvctrl0:amd64 (470.57.02-2) ...
- Setting up libcamd2:amd64 (1:5.8.1+dfsg-2) ...
- Setting up libmongoose2:amd64 (1:5.8.1+dfsg-2) ...
- Setting up libjs-jquery-ui (1.12.1+dfsg-8) ...
- Setting up libxfixes3:amd64 (1:5.0.3-2) ...
- Setting up libllvm12:amd64 (1:12.0.1-7) ...
- Setting up libfftw3-quad3:amd64 (3.3.8-2) ...
- Setting up shared-mime-info (2.0-1) ...
- Setting up opencl-clhpp-headers (3.0~2.0.15-1) ...
- Setting up libevent-dev (2.1.12-stable-1) ...
- Setting up ocl-icd-opencl-dev:amd64 (2.2.14-2) ...
- Setting up autoconf (2.71-2) ...
- Setting up libdrm2:amd64 (2.4.107-2) ...
- Setting up libnl-3-dev:amd64 (3.4.0-1+b1) ...
- Setting up libopenblas0:amd64 (0.3.17+ds-2) ...
- Setting up libklu1:amd64 (1:5.8.1+dfsg-2) ...
- Setting up libccolamd2:amd64 (1:5.8.1+dfsg-2) ...
- Setting up procps (2:3.3.17-5) ...
- Setting up cmake (3.18.4-2) ...
- Setting up libgfortran-10-dev:amd64 (10.3.0-9) ...
- Setting up libcholmod3:amd64 (1:5.8.1+dfsg-2) ...
- Setting up python3.9 (3.9.7-1) ...
- Setting up binutils-x86-64-linux-gnu (2.37-5) ...
- Setting up libdrm-amdgpu1:amd64 (2.4.107-2) ...
- Setting up automake (1:1.16.4-1) ...
- update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
- Setting up libopenblas-pthread-dev:amd64 (0.3.17+ds-2) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode
- update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode
- update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblas.so to provide /usr/lib/x86_64-linux-gnu/libopenblas.so (libopenblas.so-x86_64-linux-gnu) in auto mode
- Setting up mesa-vulkan-drivers:amd64 (21.2.1-2) ...
- Setting up libspqr2:amd64 (1:5.8.1+dfsg-2) ...
- Setting up libibverbs1:amd64 (33.2-1) ...
- Setting up libdrm-nouveau2:amd64 (2.4.107-2) ...
- Setting up libstdc++-10-dev:amd64 (10.3.0-9) ...
- Setting up libgbm1:amd64 (21.2.1-2) ...
- Setting up ibverbs-providers:amd64 (33.2-1) ...
- Setting up libfftw3-bin (3.3.8-2) ...
- Setting up libdrm-radeon1:amd64 (2.4.107-2) ...
- Setting up libdrm-intel1:amd64 (2.4.107-2) ...
- Setting up libgl1-mesa-dri:amd64 (21.2.1-2) ...
- Setting up python3 (3.9.2-3) ...
- running python rtupdate hooks for python3.9...
- running python post-rtupdate hooks for python3.9...
- Setting up binutils (2.37-5) ...
- Setting up libhwloc-plugins:amd64 (2.5.0+dfsg-2) ...
- Setting up libnl-route-3-dev:amd64 (3.4.0-1+b1) ...
- Setting up libltdl-dev:amd64 (2.4.6-15) ...
- Setting up libopenblas-dev:amd64 (0.3.17+ds-2) ...
- Setting up libegl-mesa0:amd64 (21.2.1-2) ...
- Setting up libumfpack5:amd64 (1:5.8.1+dfsg-2) ...
- Setting up gcc-10 (10.3.0-9) ...
- Setting up libpetsc3.14-dev-common (3.14.5+dfsg1-4) ...
- Setting up libegl1:amd64 (1.3.4-1) ...
- Setting up libhwloc-dev:amd64 (2.5.0+dfsg-2) ...
- Setting up libsuperlu-dev:amd64 (5.2.2+dfsg1-2) ...
- Setting up libfftw3-dev:amd64 (3.3.8-2) ...
- Setting up librdmacm1:amd64 (33.2-1) ...
- Setting up libpetsc3.14-dev-examples (3.14.5+dfsg1-4) ...
- Setting up libucx0:amd64 (1.11.1-1) ...
- Setting up libglx-mesa0:amd64 (21.2.1-2) ...
- Setting up g++-10 (10.3.0-9) ...
- Setting up libglx0:amd64 (1.3.4-1) ...
- Setting up libsuitesparse-dev:amd64 (1:5.8.1+dfsg-2) ...
- Setting up libpmix2:amd64 (4.1.0-3) ...
- Setting up libibverbs-dev:amd64 (33.2-1) ...
- Setting up libgl1:amd64 (1.3.4-1) ...
- Setting up gfortran-10 (10.3.0-9) ...
- Setting up libglx-dev:amd64 (1.3.4-1) ...
- Setting up libgl-dev:amd64 (1.3.4-1) ...
- Setting up libpmix-dev:amd64 (4.1.0-3) ...
- Setting up libfabric1 (1.11.0-2) ...
- Setting up libegl-dev:amd64 (1.3.4-1) ...
- Setting up libopenmpi3:amd64 (4.1.1-4) ...
- Setting up libptscotch-6.1:amd64 (6.1.0-2) ...
- Setting up libfftw3-mpi3:amd64 (3.3.8-2) ...
- Setting up gfortran (4:10.2.1-1) ...
- update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
- update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
- Setting up libcaf-openmpi-3:amd64 (2.9.2-3) ...
- Setting up libgles-dev:amd64 (1.3.4-1) ...
- Setting up openmpi-bin (4.1.1-4) ...
- update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode
- update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode
- Setting up libhdf5-openmpi-103-1:amd64 (1.10.6+repack-5) ...
- Setting up libcombblas1.16.0:amd64 (1.6.2-6) ...
- Setting up libcoarrays-dev:amd64 (2.9.2-3) ...
- Setting up libfftw3-mpi-dev:amd64 (3.3.8-2) ...
- Setting up mpi-default-bin (1.14) ...
- Setting up libglvnd-dev:amd64 (1.3.4-1) ...
- Setting up libcoarrays-openmpi-dev:amd64 (2.9.2-3) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/open-coarrays/openmpi/bin/caf to provide /usr/bin/caf.openmpi (caf-openmpi) in auto mode
- update-alternatives: using /usr/bin/caf.openmpi to provide /usr/bin/caf (caf) in auto mode
- Setting up libhdf5-openmpi-fortran-102:amd64 (1.10.6+repack-5) ...
- Setting up libhdf5-openmpi-hl-100:amd64 (1.10.6+repack-5) ...
- Setting up libgl1-mesa-dev:amd64 (21.2.1-2) ...
- Setting up libsuperlu-dist6:amd64 (6.2.0+dfsg1-3) ...
- Setting up libsundials-nvecparallel-mpi4:amd64 (5.7.0+dfsg-1) ...
- Setting up libopenmpi-dev:amd64 (4.1.1-4) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode
- Setting up libhdf5-openmpi-cpp-103-1:amd64 (1.10.6+repack-5) ...
- Setting up libhdf5-openmpi-hl-cpp-100:amd64 (1.10.6+repack-5) ...
- Setting up libhdf5-openmpi-hl-fortran-100:amd64 (1.10.6+repack-5) ...
- Setting up libscalapack-openmpi2.1:amd64 (2.1.0-4) ...
- Setting up libhypre:amd64 (2.18.2-1) ...
- Setting up libsuperlu-dist-dev:amd64 (6.2.0+dfsg1-3) ...
- Setting up libscalapack-openmpi-dev:amd64 (2.1.0-4) ...
- Setting up libmumps-5.3:amd64 (5.3.5-2) ...
- Setting up mpi-default-dev (1.14) ...
- Setting up libscalapack-mpi-dev:amd64 (2.1.0-4) ...
- Setting up libhdf5-openmpi-dev (1.10.6+repack-5) ...
- update-alternatives: using /usr/bin/h5pcc.openmpi to provide /usr/bin/h5pcc (h5pcc) in auto mode
- update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-openmpi.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode
- update-alternatives: updating alternative /usr/bin/mpicc.openmpi because link group mpi has changed slave links
- update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-mpi.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode
- Setting up libmumps-dev:amd64 (5.3.5-2) ...
- Setting up libscotch-dev (6.1.0-2) ...
- Setting up libpetsc-real3.14:amd64 (3.14.5+dfsg1-4) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.14.5 to provide /usr/lib/x86_64-linux-gnu/libpetsc.so.3.14 (libpetsc.so.3.14) in auto mode
- Setting up libsundials-nvecparallel-hypre4:amd64 (5.7.0+dfsg-1) ...
- Setting up libhypre-dev:amd64 (2.18.2-1) ...
- Setting up libptscotch-dev (6.1.0-2) ...
- Setting up libsundials-nvecparallel-petsc4:amd64 (5.7.0+dfsg-1) ...
- Setting up libhdf5-mpi-dev (1.10.6+repack-5) ...
- Setting up libsundials-sunlinsol2:amd64 (5.7.0+dfsg-1) ...
- Setting up libpetsc-real3.14-dev:amd64 (3.14.5+dfsg1-4) ...
- update-alternatives: error: no alternatives for petsc
- update-alternatives: using /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real to provide /usr/lib/petsc (petsc) in auto mode
- update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.14.5 to provide /usr/lib/x86_64-linux-gnu/libpetsc_real.so (libpetsc_real.so) in auto mode
- update-alternatives: using /usr/lib/petscdir/petsc3.14/x86_64-linux-gnu-real to provide /usr/lib/petscdir/3.14 (petsc3.14) in auto mode
- Setting up libpetsc-real-dev (3.14.5+dfsg1-4) ...
- Setting up petsc-dev (3.14.5+dfsg1-4) ...
- Setting up libsundials-dev (5.7.0+dfsg-1) ...
- Processing triggers for libc-bin (2.31-13) ...
<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
Processing 2/3: [conf-sundials: cc test.c]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "cc" "-E" "test.c" (CWD=/home/opam/.opam/4.08.1/.opam-switch/build/conf-sundials.1)
- # 1 "test.c"
- # 1 "<built-in>"
- # 1 "<command-line>"
- # 31 "<command-line>"
- # 1 "/usr/include/stdc-predef.h" 1 3 4
- # 32 "<command-line>" 2
- # 1 "test.c"
- # 1 "/usr/include/sundials/sundials_config.h" 1 3 4
- # 17 "/usr/include/sundials/sundials_config.h" 3 4
- # 1 "/usr/include/sundials/sundials_export.h" 1 3 4
- # 18 "/usr/include/sundials/sundials_config.h" 2 3 4
- # 2 "test.c" 2
-> compiled conf-sundials.1
-> installed conf-sundials.1
Done.
# Run eval $(opam env) to update the current shell environment
2021-09-03 15:22.32 ---> saved as "930fb0711b6b7de515c385fa54cf4e12017483c3104c20f9990ecb1133451c4e"
Job succeeded
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