Building on laodoke.caelum.ci.dev
(from ocaml/opam:debian-unstable)
2024-01-25 01:35.24 ---> using "0acd5aeaa8f7bc314514d9795d14a7f12ec72a6a5b11c5904350189734c6859b" from cache
/: (user (uid 1000) (gid 1000))
/: (env OPAMPRECISETRACKING 1)
/: (env OPAMUTF8 never)
/: (env OPAMEXTERNALSOLVER builtin-0install)
/: (env OPAMCRITERIA +removed)
/: (run (shell "sudo ln -f /usr/bin/opam-dev /usr/bin/opam"))
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/: (run (network host)
(shell "rm -rf ~/opam-repository && git clone -q 'https://github.com/ocaml/opam-repository' ~/opam-repository && git -C ~/opam-repository checkout -q cd449b28e1149a5bafa7f1c6262879ce509b7eea"))
2024-01-25 01:35.24 ---> using "f49b41da76612ebccc274a9a68a791e209420ae47e4048a35065abe0a3c908f5" from cache
/: (run (shell "rm -rf ~/.opam && opam init -ya --bare --config ~/.opamrc-sandbox ~/opam-repository"))
Configuring from /home/opam/.opamrc-sandbox, then /home/opam/.opamrc, and finally from built-in defaults.
Checking for available remotes: rsync and local, git.
- you won't be able to use mercurial repositories unless you install the hg command on your system.
- you won't be able to use darcs repositories unless you install the darcs command on your system.
<><> Fetching repository information ><><><><><><><><><><><><><><><><><><><><><>
[default] Initialised
User configuration:
~/.profile is already up-to-date.
[NOTE] Make sure that ~/.profile is well sourced in your ~/.bashrc.
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/: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
(network host)
(shell "opam switch create --repositories=default '4.10' '4.10.2'"))
<><> Installing new switch packages <><><><><><><><><><><><><><><><><><><><><><>
Switch invariant: ["ocaml-base-compiler" {= "4.10.2"} | "ocaml-system" {= "4.10.2"}]
<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
-> installed base-bigarray.base
-> installed base-threads.base
-> installed base-unix.base
-> retrieved ocaml-base-compiler.4.10.2 (cached)
-> installed ocaml-base-compiler.4.10.2
-> installed ocaml-config.1
-> installed ocaml.4.10.2
Done.
# Run eval $(opam env --switch=4.10) to update the current shell environment
2024-01-25 01:35.24 ---> using "f3ccc90a6bbf6af4ccc03ecb808c72ee32ecec163e318db705c178249819d23d" from cache
/: (run (network host)
(shell "opam update --depexts"))
+ /usr/bin/sudo "apt-get" "update"
- Get:1 http://deb.debian.org/debian unstable InRelease [198 kB]
- Get:2 http://deb.debian.org/debian unstable/main amd64 Packages.diff/Index [63.6 kB]
- Get:3 http://deb.debian.org/debian unstable/main amd64 Packages T-2024-01-24-2005.16-F-2024-01-12-1405.21.pdiff [620 kB]
- Get:3 http://deb.debian.org/debian unstable/main amd64 Packages T-2024-01-24-2005.16-F-2024-01-12-1405.21.pdiff [620 kB]
- Fetched 882 kB in 3s (291 kB/s)
- Reading package lists...
2024-01-25 01:35.24 ---> using "03595f389246cb8cc450e0a26d29aeacf1b8dbcdc1ccb76c62d4eef1bd4546c6" from cache
/: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
(network host)
(shell "\
\nopam remove -y \"conf-rdkit.1\"\
\nopam install -vy \"conf-rdkit.1\"\
\nres=$?\
\nif [ $res = 31 ]; then\
\n if opam show -f x-ci-accept-failures: \"conf-rdkit.1\" | grep -q '\"debian-unstable\"'; then\
\n echo \"This package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\"\
\n exit 69\
\n fi\
\nfi\
\n\
\n\
\nexit $res\
\n"))
[NOTE] conf-rdkit.1 is not installed.
Nothing to do.
The following actions will be performed:
=== install 1 package
- install conf-rdkit 1
The following system packages will first need to be installed:
librdkit-dev python3-rdkit
<><> Handling external dependencies <><><><><><><><><><><><><><><><><><><><><><>
opam believes some required external dependencies are missing. opam can:
> 1. Run apt-get to install them (may need root/sudo access)
2. Display the recommended apt-get command and wait while you run it manually (e.g. in another terminal)
3. Continue anyway, and, upon success, permanently register that this external dependency is present, but not detectable
4. Abort the installation
[1/2/3/4] 1
+ /usr/bin/sudo "apt-get" "install" "-qq" "-yy" "librdkit-dev" "python3-rdkit"
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- Setting up libpython3.12-stdlib:amd64 (3.12.1-2) ...
- Setting up libpython3.11:amd64 (3.11.7-2) ...
- Setting up python3.12 (3.12.1-2) ...
- Setting up python3 (3.11.6-1) ...
- running python rtupdate hooks for python3.11...
- running python post-rtupdate hooks for python3.11...
- Setting up libmaeparser1:amd64 (1.3.1-1+b1) ...
- Setting up libgprofng0:amd64 (2.41.90.20240122-1) ...
- Setting up libgcc-13-dev:amd64 (13.2.0-10) ...
- Setting up libstdc++-13-dev:amd64 (13.2.0-10) ...
- Setting up binutils-x86-64-linux-gnu (2.41.90.20240122-1) ...
- Setting up python3-pkg-resources (68.1.2-2) ...
- Setting up librdkit1 (202309.3-2) ...
- Setting up binutils (2.41.90.20240122-1) ...
- Setting up gcc-13 (13.2.0-10) ...
- Setting up librdkit-dev (202309.3-2) ...
- Setting up python3-numpy (1:1.24.2-2) ...
- Setting up g++-13 (13.2.0-10) ...
- Setting up python3-rdkit (202309.3-2) ...
- Processing triggers for libc-bin (2.37-13) ...
<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
Processing 2/3: [conf-rdkit: sh]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "sh" "-c" "c++ test.cpp -o test -I/usr/include/rdkit -lRDKitRDGeneral -DSWIG || c++ test.cpp -o test -I/usr/include/rdkit -lRDGeneral -DSWIG" (CWD=/home/opam/.opam/4.10/.opam-switch/build/conf-rdkit.1)
Processing 2/3: [conf-rdkit: ./test]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "./test" (CWD=/home/opam/.opam/4.10/.opam-switch/build/conf-rdkit.1)
- 2023.09.3
-> compiled conf-rdkit.1
-> installed conf-rdkit.1
Done.
# Run eval $(opam env) to update the current shell environment
2024-01-25 01:41.19 ---> saved as "6744a8a630689e12d5142b6d86d642f5e06feef3ba9d3d1794144ab4422f8fe0"
Job succeeded
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